PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK28347.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family NAC
Protein Properties Length: 181aa    MW: 20591.1 Da    PI: 10.2852
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK28347.2genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.73.3e-21149257128
        NAM  57 ewyfFskrdkkyatgkrknratk......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                  +fF++ +k+y+tg+rk+r+++      + +W++tgk+++v++ +g+++g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  PK28347.2  14 VRHFFHRPSKAYTTGTRKRRKVHtdeeggETRWHKTGKTRPVFV-GGRVKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 92 
                459*****************744456555778************.9*************6657999999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.9721111IPR003441NAC domain
SuperFamilySSF1019418.37E-259111IPR003441NAC domain
PfamPF023657.1E-81692IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MGVHAAGVRK DGLVRHFFHR PSKAYTTGTR KRRKVHTDEE GGETRWHKTG KTRPVFVGGR  60
VKGYKKILVL YTNYGKQRKP EKTNWVMHQY HLGNNEEEKE GELVVSKVFY QTQPRQCGSV  120
IKDLLNPPKN NNNLRQNDES FVEYSCNIPN SFISFDHAAQ NGGTTPEISV THFGAGSFLN  180
S
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015881279.11e-84PREDICTED: NAC domain-containing protein 73-like
RefseqXP_015881280.11e-84PREDICTED: NAC domain-containing protein 73-like
SwissprotO494593e-70NAC73_ARATH; NAC domain-containing protein 73
TrEMBLB9MYC73e-84B9MYC7_POPTR; No apical meristem family protein
STRINGPOPTR_0017s04800.19e-84(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1987955
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.19e-59NAC domain containing protein 73